Class PopupOrderedCondChooser

java.lang.Object
  |
  +--java.awt.Component
        |
        +--java.awt.Container
              |
              +--java.awt.Window
                    |
                    +--java.awt.Frame
                          |
                          +--PopupOrderedCondChooser

All Implemented Interfaces:

javax.accessibility.Accessible, java.awt.event.ActionListener, java.util.EventListener, java.awt.image.ImageObserver, java.awt.event.ItemListener, java.awt.MenuContainer, java.io.Serializable, java.awt.event.WindowListener

public class PopupOrderedCondChooser

extends java.awt.Frame

implements java.awt.event.ActionListener, java.awt.event.WindowListener, java.awt.event.ItemListener

Class PopupOrderedCondChooser - GUI to allow users to create Ordered Condition Lists (OCL), assign conditions, define parameters for OCLs and save within MAExplorer to be used in reports/plots etc. This lets the user create, and edit conditions and properties.

 Description:
 The user is given a list of ordered condition list names. They then 
 select one which causes the listed of conditions to be displayed in the 
 REMAINDER and SELECTED scrollable lists that are assigned to the 
 OrderedCondChooserGUI (upper part of the window). The REMAINDER list of 
 conditions is the list of all conditons less the SELECTED conditions.

 Each oredered condition list has a corresponding (right & left) list of 
 parameters which are placed into the  * NAME and VALUE paired entries in a 
 scroll pane in the lower right.

 Saving a ordered condition list, copies the SELECTED condtion to the named 
 condition list using the mjaCondition methods. It also saves the associated 
 parameter (name[],value[]) list for that ordered condition list using the 
 mjaCondition methods.

 New ordered condition lists may be defined and the SELECTED list is set to 
 empty and the associated parameter lists are set to empty.

 New parameters may be defined and are added to the end of the list. Since ALL
 conditions, use the same list of parameter names, then ALL condition parameter
 lists must be extended and saved when the  ordered condition lists are saved.

 Condition Parameter data is read in (UserStata.java) or uses default values.

 It contains the following classes:
 1. OclListData contains the active remainder and selected condition data for
    a ordered condition list instance.
 2. CondParamEditForm creates a ScrollPane of the (name,value) parameters
    for the condition instance.
 3. CondDialogBox is a dialog box with with two buttons yesMsg and noMsg that 
    will return true or false when pressed.
 4. PopupTextField is a simple "editor" for adding a string value. 

This work was produced by Peter Lemkin of the National Cancer Institute, an agency of the United States Government. As a work of the United States Government there is no associated copyright. It is offered as open source software under the Mozilla Public License (version 1.1) subject to the limitations noted in the accompanying LEGAL file. This notice must be included with the code. The MAExplorer Mozilla and Legal files are available on http://maexplorer.sourceforge.net/.

Version:

$Date: 2003/07/17 20:37:13 $ $Revision: 1.9 $

Author:

G. Thornwall (SAIC), P. Lemkin (NCI), NCI-Frederick, Frederick, MD

See Also:

MAExplorer Home, Serialized Form

Inner Class Summary

(package private) class	PopupOrderedCondChooser.ChoiceList Class ChoiceList Allows user to pick an item in a list of items
(package private) class	PopupOrderedCondChooser.CondDialogBox Class CondDialogBox is a dialog box with with two buttons yesMsg and noMsg that will return true or false when pressed.
(package private) class	PopupOrderedCondChooser.CondParamEditForm Class CondParamEditForm creates a ScrollPane of the (name,value) parameters for the current condition instance.
(package private) class	PopupOrderedCondChooser.OclListData Class OclListData contains the active remainder and selected cond data for a ordered condition instance.
private class	PopupOrderedCondChooser.PopupTextField Class PopupTextField is a simple "editor" for entering a string value.

Inner classes inherited from class java.awt.Frame

java.awt.Frame.AccessibleAWTFrame

Inner classes inherited from class java.awt.Window

java.awt.Window.AccessibleAWTWindow

Inner classes inherited from class java.awt.Container

java.awt.Container.AccessibleAWTContainer

Inner classes inherited from class java.awt.Component

java.awt.Component.AccessibleAWTComponent, java.awt.Component.AWTTreeLock

Field Summary

private java.awt.Button	addAnnButton add annotation
private java.awt.Button	addOCLButton add ordered cond list
private java.lang.String[]	allConditionNames list of all condition names
private java.lang.String	banner Title banner for the main window
static java.lang.String	BANNER
private java.awt.Font	buttonFont font for buttons
private java.awt.Button	cancelButton cancel
private java.awt.Panel	chooserPanel Panel for condition data
private java.awt.TextField	condErrorMsgTf error msg display
private java.awt.Font	condFont font for conditions
static boolean	CONSOLE_FLAG
private PopupOrderedCondChooser.CondParamEditForm	cpef CondParamEditForm instance
private java.lang.String	curCond The current condition name that is selected in the lower OCL list
private int	curCondIdx current cond index
private java.lang.String[]	curCondNames The current condition list of names
private java.lang.String	curOclListName show current condition name
private java.awt.Label	curOclNameLabel show current condition name
private java.awt.Color	dataBkgrd Text data report background color that may be changed
private java.awt.Color	dataColor Text data report foreground color that may be changed
private java.awt.Font	dataFont font for data used in the Chooser GUI
static java.lang.String	DATE
static boolean	DBUG_FLAG
private java.awt.Button	doneButton done
static int	FATAL_MSG Error codes for reportMsg()
private java.lang.String	fontFamily Font family from MAExplorer - using mjaProperty.getReportFontFamily()
private java.awt.Font	labelFont font for labels
private java.awt.Button	listAllButton list all ordered cond lists
private java.awt.Button	listOCLButton list order cond
static int	LOG_MSG Error codes for reportMsg()
private int	maxNbrCond Maximum # of Conditions currently in the database.
static int	maxPossibleConditions max possible conditions
private static int	maxPossibleOcl maximum possible number of Ordered Lists of Conditions
private static int	maxPossibleOCLParam maximum possible number of OCL parameters
static int	MIN_WINDOW_HEIGHT
static int	MIN_WINDOW_WIDTH MIN size of scrollable Canvas
private MJAcondition	mjaCondition MaeJavaAPI classes
private MJAfilter	mjaFilter
private MJAproperty	mjaProperty
private MJAreport	mjaReport
private MJAutil	mjaUtil
private java.awt.Color	msgBkgrd Text message background color that may be changed
private java.awt.Color	msgColor Text message foreground color that may be changed
private java.awt.Font	msgFont font for title at the top of the main window
private java.awt.TextField	msgTF Text message report line
private int	nbrOclLists number of condition lists
private int	nbrParams # of condition parameters
static boolean	NEVER
private PopupOrderedCondChooser.OclListData[]	oclLd List [0:maxPossibleCond-1] of working condition data: name, selected and remainder cond, param form (name,value).
private java.awt.List	oclList The working list of conditions for GUI
private java.awt.Panel	oclPanel Panel to hold conditions list (LEFT) and Param Editor (RIGHT)
private static PopupOrderedCondChooser	oldOCC previous instance if not null so can close it before starting new instance.
private PopupOrderedCondChooserGUI	oldPccg previous chooser GUI for cond data
private java.lang.String[]	orderedCondListNames list of condition names
private java.awt.Font	paramFont font for parameter Name and Value
private java.lang.String[]	paramNames list [0:nbrOclLists-1] of condition parameter names for CondParamEditForm.
private PopupOrderedCondChooserGUI	pccg Ordered chooser GUI for cond data
private int	pccgHeight size for PopupOrderedCondChooserGUI
private int	pccgWidth size for PopupOrderedCondChooserGUI
private java.awt.TextField	pccMsgTxtField1 msg display 1
private java.awt.TextField	pccMsgTxtField2 msg display 2
private java.awt.TextField	pccMsgTxtField3 msg display 3
private int	preferredHeight preferred height size of frame
private int	preferredWidth preferred width size of frame
private int	prevCPEFidx previous CondParamEditForm index
private java.lang.String[]	remCondTmp remaining conditions before edit
private java.awt.Button	removeOCLButton remove order cond list
private java.lang.String	remTitle title of remainder TextArea for PopupOrderedCondChooserGUI
static java.lang.String	REVISION
private java.awt.Button	rmvAnnButton remove annotation
private java.awt.Button	saveButton save to MAExplorer
private boolean	saveFlag see if saved ok
private boolean	saveReportAsTextFileFlag Flag enabled if doing "SaveAs"
private java.lang.String[]	selCondTmp selected conditions before edit
private java.lang.String	selTitle title of selected TextArea for PopupOrderedCondChooserGUI
private java.awt.Font	titleFont font for labels
private boolean	valueChangedFlag if something is changed, need to save it so keep track
static java.lang.String	VERSION
static int	WARNING_MSG Error codes for reportMsg()

Fields inherited from class java.awt.Frame

base, CROSSHAIR_CURSOR, DEFAULT_CURSOR, E_RESIZE_CURSOR, frameSerializedDataVersion, HAND_CURSOR, icon, ICONIFIED, mbManagement, menuBar, MOVE_CURSOR, N_RESIZE_CURSOR, nameCounter, NE_RESIZE_CURSOR, NORMAL, NW_RESIZE_CURSOR, ownedWindows, resizable, S_RESIZE_CURSOR, SE_RESIZE_CURSOR, serialVersionUID, state, SW_RESIZE_CURSOR, TEXT_CURSOR, title, W_RESIZE_CURSOR, WAIT_CURSOR, weakThis

Fields inherited from class java.awt.Window

active, dbg, focusMgr, inputContext, inputContextLock, OPENED, ownedWindowList, showWithParent, warningString, windowListener, windowSerializedDataVersion

Fields inherited from class java.awt.Container

component, containerListener, containerSerializedDataVersion, dispatcher, layoutMgr, listeningBoundsChildren, listeningChildren, maxSize, ncomponents, printing, printingThreads

Fields inherited from class java.awt.Component

accessibleContext, actionListenerK, adjustmentListenerK, appContext, background, BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, changeSupport, componentListener, componentListenerK, componentOrientation, componentSerializedDataVersion, containerListenerK, cursor, dropTarget, enabled, eventMask, focusListener, focusListenerK, font, foreground, graphicsConfig, hasFocus, height, hierarchyBoundsListener, hierarchyBoundsListenerK, hierarchyListener, hierarchyListenerK, incRate, inputMethodListener, inputMethodListenerK, isInc, isPacked, itemListenerK, keyListener, keyListenerK, LEFT_ALIGNMENT, locale, LOCK, metrics, minSize, mouseListener, mouseListenerK, mouseMotionListener, mouseMotionListenerK, name, nameExplicitlySet, newEventsOnly, ownedWindowK, parent, peer, peerFont, popups, prefSize, privateKey, RIGHT_ALIGNMENT, textListenerK, TOP_ALIGNMENT, valid, visible, width, windowClosingException, windowListenerK, x, y

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Constructor Summary

PopupOrderedCondChooser(MaeJavaAPI mja, PopupOrderedCondChooser oldPCC)
PopupOrderedCondChooser() - Constructor

Method Summary

void	actionPerformed(java.awt.event.ActionEvent e) actionPerformed() - Handle Control panel button clicks
private void	addAllCondForOCL(java.lang.String cond, int newCurIndex) addAllCondForOCL() - Place cond data associated with new ordered condition list into ChooserGUI.
private void	addNewCondition() addNewCondition() - add new condition to local chooser database and leave it as the selected condition
void	addNewParameter() addNewParameter() - add a new parameter locally.
void	buildGUI() buildGUI() - build the graphical user interface for PopupOrderedCondChooser.
private java.lang.String[]	calcRemCond(java.lang.String condListName, int curIndex) calcRemCond() - compute remainder list of condition names (R = DB - Ci) where DB is all of the Conds in the database, and Ci are the Conds in condition Ci.
(package private) void	clearInfo() clearInfo() - clear info for the 3 msg areas in the PopupOrderedCondChooser
void	close() close() - close this popup
(package private) int	getOCLidxFromName(java.lang.String oclName) getOCLidxFromName() - Look up and return index of current ocl.
(package private) java.lang.String	getOCLnameFromIdx(int oclIdx) getOCLnameFromIdx() - Look up and return name of current ocl.
private java.lang.String[]	getRemCondData(int index) getRemCondData() - get remainder data, locally.
private java.lang.String[]	getRemCondDataFromChooserGUI(int index) getRemCondDataFromChooserGUI() - get remainder data from chooserGUI
private java.lang.String[]	getSelCondData(int index) getSelCondData() - get Select data, locally.
private java.lang.String[]	getSelCondDataFromChooserGUI(int index) getSelCondDataFromChooserGUI() - get selected data from chooserGUI
boolean	handleEvent(java.awt.Event evt) handleEvent() - process special events
(package private) void	initData() initData() - initialize the database.
void	itemStateChanged(java.awt.event.ItemEvent ie) itemStateChanged() - user clicked on condtion in the ocl list, must change CondParamEditForm data, remainder and selected data, save condForm data.
void	paint(java.awt.Graphics g) paint() - repaint full scrolled text area.
void	removeLocalParameter() removeLocalParameter() - remove parameter locally for all conditions
void	removeOCLLocally() removeOCLLocally() - remove user specified condition locally.
private void	saveAllCondsToMaeState() saveAllCondsToMaeState() - save all conditions to MAExplorer state
private boolean	saveCondState(PopupOrderedCondChooser.OclListData[] oclLdList, int nCondLists) saveCondState() - saves all conditions and ocl param (N,V) data to MAE via MJAcondition.
void	setupCondData() setupCondData() - get remainder and selected condition data, & parameters from MJA (indirectly from mae) and set up the oclLd[] array of ordered condition data.
void	update(java.awt.Graphics g) update() - update window
void	updateCurGene(int mid) updateCurGene() - update any data since current gene has changed.
void	updateFilter() updateFilter() - update any dependent data since Filter has changed.
(package private) void	updateInfo(java.lang.String condName) updateInfo() - update the info text fields for selected HP.
void	updateLabels() updateLabels() - update any dependent data since global labels have changed.
void	updateSlider() updateSlider() - update any dependent data sincea threshold slider has changed.
void	windowActivated(java.awt.event.WindowEvent e)
void	windowClosed(java.awt.event.WindowEvent e)
void	windowClosing(java.awt.event.WindowEvent e) windowClosing() - close down the window.
void	windowDeactivated(java.awt.event.WindowEvent e)
void	windowDeiconified(java.awt.event.WindowEvent e)
void	windowIconified(java.awt.event.WindowEvent e)
void	windowOpened(java.awt.event.WindowEvent e)

Methods inherited from class java.awt.Frame

, addNotify, addToFrameList, constructComponentName, finalize, getAccessibleContext, getCursorType, getFrames, getIconImage, getMenuBar, getState, getTitle, initIDs, isResizable, paramString, postProcessKeyEvent, readObject, remove, removeFromFrameList, removeNotify, setCursor, setIconImage, setMenuBar, setResizable, setState, setTitle, writeObject

Methods inherited from class java.awt.Window

addOwnedWindow, addWindowListener, adjustListeningChildren, applyResourceBundle, applyResourceBundle, connectOwnedWindow, dispatchEventImpl, dispose, eventEnabled, getFocusOwner, getGraphicsConfiguration, getInputContext, getListeners, getLocale, getOwnedWindows, getOwner, getToolkit, getWarningString, hide, isActive, isShowing, nextFocus, ownedInit, pack, postEvent, postWindowEvent, preProcessKeyEvent, processEvent, processWindowEvent, removeOwnedWindow, removeWindowListener, resetGC, setCursor, setFocusOwner, setWarningString, show, toBack, toFront, transferFocus

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, addImpl, applyOrientation, checkGD, countComponents, createChildHierarchyEvents, createHierarchyEvents, deliverEvent, dispatchEventToSelf, doLayout, findComponentAt, findComponentAt, findComponentAt, getAccessibleAt, getAccessibleChild, getAccessibleChildrenCount, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents_NoClientCode, getComponents, getInsets, getLayout, getMaximumSize, getMinimumSize, getMouseEventTarget, getPreferredSize, getWindow, insets, invalidate, invalidateTree, isAncestorOf, layout, lightweightPaint, lightweightPrint, list, list, locate, minimumSize, numListening, paintComponents, paintHeavyweightComponents, postsOldMouseEvents, preferredSize, print, printComponents, printHeavyweightComponents, processContainerEvent, proxyEnableEvents, proxyRequestFocus, remove, remove, removeAll, removeContainerListener, setFont, setLayout, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addPropertyChangeListener, addPropertyChangeListener, areInputMethodsEnabled, bounds, checkImage, checkImage, checkWindowClosingException, coalesceEvents, contains, contains, createImage, createImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, getAccessibleIndexInParent, getAccessibleStateSet, getBackground, getBounds, getBounds, getColorModel, getComponentOrientation, getCursor, getDropTarget, getFont_NoClientCode, getFont, getFontMetrics, getForeground, getGraphics, getHeight, getInputMethodRequests, getLocation, getLocation, getLocationOnScreen_NoTreeLock, getLocationOnScreen, getName, getNativeContainer, getParent_NoClientCode, getParent, getPeer, getSize, getSize, getToolkitImpl, getTreeLock, getWidth, getWindowForObject, getX, getY, gotFocus, hasFocus, imageUpdate, inside, isDisplayable, isDoubleBuffered, isEnabled, isEnabledImpl, isFocusTraversable, isLightweight, isOpaque, isRecursivelyVisible, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, repaint, requestFocus, reshape, resize, resize, setBackground, setBounds, setBounds, setComponentOrientation, setDropTarget, setEnabled, setForeground, setLocale, setLocation, setLocation, setName, setSize, setSize, setVisible, show, size, toString, transferFocus

Methods inherited from class java.lang.Object

clone, equals, getClass, hashCode, notify, notifyAll, registerNatives, wait, wait, wait

Methods inherited from interface java.awt.MenuContainer

getFont, postEvent

Field Detail

DBUG_FLAG

public static final boolean DBUG_FLAG

DATE

public static final java.lang.String DATE

REVISION

public static final java.lang.String REVISION

VERSION

public static final java.lang.String VERSION

BANNER

public static final java.lang.String BANNER

CONSOLE_FLAG

public static final boolean CONSOLE_FLAG

NEVER

public static final boolean NEVER

FATAL_MSG

public static final int FATAL_MSG

Error codes for reportMsg()

WARNING_MSG

public static final int WARNING_MSG

Error codes for reportMsg()

LOG_MSG

public static final int LOG_MSG

Error codes for reportMsg()

MIN_WINDOW_WIDTH

public static final int MIN_WINDOW_WIDTH

MIN size of scrollable Canvas

MIN_WINDOW_HEIGHT

public static final int MIN_WINDOW_HEIGHT

maxPossibleOcl

private static int maxPossibleOcl

maximum possible number of Ordered Lists of Conditions

maxPossibleOCLParam

private static int maxPossibleOCLParam

maximum possible number of OCL parameters

maxPossibleConditions

public static int maxPossibleConditions

max possible conditions

oldOCC

private static PopupOrderedCondChooser oldOCC

previous instance if not null so can close it before starting new instance.

mjaCondition

private MJAcondition mjaCondition

MaeJavaAPI classes

mjaFilter

private MJAfilter mjaFilter

mjaProperty

private MJAproperty mjaProperty

mjaReport

private MJAreport mjaReport

mjaUtil

private MJAutil mjaUtil

addOCLButton

private java.awt.Button addOCLButton

add ordered cond list

removeOCLButton

private java.awt.Button removeOCLButton

remove order cond list

listOCLButton

private java.awt.Button listOCLButton

list order cond

listAllButton

private java.awt.Button listAllButton

list all ordered cond lists

addAnnButton

private java.awt.Button addAnnButton

add annotation

rmvAnnButton

private java.awt.Button rmvAnnButton

remove annotation

saveButton

private java.awt.Button saveButton

save to MAExplorer

doneButton

private java.awt.Button doneButton

done

cancelButton

private java.awt.Button cancelButton

cancel

pccgWidth

private int pccgWidth

size for PopupOrderedCondChooserGUI

pccgHeight

private int pccgHeight

size for PopupOrderedCondChooserGUI

preferredHeight

private int preferredHeight

preferred height size of frame

preferredWidth

private int preferredWidth

preferred width size of frame

fontFamily

private java.lang.String fontFamily

Font family from MAExplorer - using mjaProperty.getReportFontFamily()

dataFont

private java.awt.Font dataFont

font for data used in the Chooser GUI

buttonFont

private java.awt.Font buttonFont

font for buttons

labelFont

private java.awt.Font labelFont

font for labels

titleFont

private java.awt.Font titleFont

font for labels

msgFont

private java.awt.Font msgFont

font for title at the top of the main window

paramFont

private java.awt.Font paramFont

font for parameter Name and Value

condFont

private java.awt.Font condFont

font for conditions

msgTF

private java.awt.TextField msgTF

Text message report line

msgColor

private java.awt.Color msgColor

Text message foreground color that may be changed

msgBkgrd

private java.awt.Color msgBkgrd

Text message background color that may be changed

dataColor

private java.awt.Color dataColor

Text data report foreground color that may be changed

dataBkgrd

private java.awt.Color dataBkgrd

Text data report background color that may be changed

oclList

private java.awt.List oclList

The working list of conditions for GUI

chooserPanel

private java.awt.Panel chooserPanel

Panel for condition data

oclPanel

private java.awt.Panel oclPanel

Panel to hold conditions list (LEFT) and Param Editor (RIGHT)

pccMsgTxtField1

private java.awt.TextField pccMsgTxtField1

msg display 1

pccMsgTxtField2

private java.awt.TextField pccMsgTxtField2

msg display 2

pccMsgTxtField3

private java.awt.TextField pccMsgTxtField3

msg display 3

condErrorMsgTf

private java.awt.TextField condErrorMsgTf

error msg display

banner

private java.lang.String banner

Title banner for the main window

oclLd

private PopupOrderedCondChooser.OclListData[] oclLd

List [0:maxPossibleCond-1] of working condition data: name, selected and remainder cond, param form (name,value).

nbrOclLists

private int nbrOclLists

number of condition lists

cpef

private PopupOrderedCondChooser.CondParamEditForm cpef

CondParamEditForm instance

curCond

private java.lang.String curCond

The current condition name that is selected in the lower OCL list

curCondNames

private java.lang.String[] curCondNames

The current condition list of names

paramNames

private java.lang.String[] paramNames

list [0:nbrOclLists-1] of condition parameter names for CondParamEditForm.

nbrParams

private int nbrParams

# of condition parameters

saveReportAsTextFileFlag

private boolean saveReportAsTextFileFlag

Flag enabled if doing "SaveAs"

saveFlag

private boolean saveFlag

see if saved ok

valueChangedFlag

private boolean valueChangedFlag

if something is changed, need to save it so keep track

remTitle

private java.lang.String remTitle

title of remainder TextArea for PopupOrderedCondChooserGUI

selTitle

private java.lang.String selTitle

title of selected TextArea for PopupOrderedCondChooserGUI

prevCPEFidx

private int prevCPEFidx

previous CondParamEditForm index

curCondIdx

private int curCondIdx

current cond index

allConditionNames

private java.lang.String[] allConditionNames

list of all condition names

orderedCondListNames

private java.lang.String[] orderedCondListNames

list of condition names

curOclNameLabel

private java.awt.Label curOclNameLabel

show current condition name

curOclListName

private java.lang.String curOclListName

show current condition name

maxNbrCond

private int maxNbrCond

Maximum # of Conditions currently in the database. This is the largest size (in # Conditions) a condition list can be.

remCondTmp

private java.lang.String[] remCondTmp

remaining conditions before edit

selCondTmp

private java.lang.String[] selCondTmp

selected conditions before edit

pccg

private PopupOrderedCondChooserGUI pccg

Ordered chooser GUI for cond data

oldPccg

private PopupOrderedCondChooserGUI oldPccg

previous chooser GUI for cond data

Constructor Detail

PopupOrderedCondChooser

public PopupOrderedCondChooser(MaeJavaAPI mja,
                               PopupOrderedCondChooser oldPCC)

PopupOrderedCondChooser() - Constructor

Parameters:

mja - interface with MAExplorer via API.

oldPCC - is previous instance if not null

See Also:

buildGUI, initData

Method Detail

initData

void initData()

initData() - initialize the database.

See Also:

getOCLidxFromName(java.lang.String), MJAcondition.getAllCondNames(), MJAcondition.getCurOCL(), MJAcondition.getMaxCondListSize(), MJAcondition.getMaxOrderedCondListSize(), MJAcondition.getNbrOrderedCondLists(), MJAcondition.getOrderedCondListsNames(), MJAcondition.getOrderedCondParamNames(), setupCondData()

setupCondData

public void setupCondData()

setupCondData() - get remainder and selected condition data, & parameters from MJA (indirectly from mae) and set up the oclLd[] array of ordered condition data.

See Also:

MJAcondition.getOrderedCondNamesInCondList(java.lang.String), MJAcondition#getOrederedCondParamValues, calcRemCond(java.lang.String, int), PopupOrderedCondChooser.OclListData, PopupOrderedCondChooser.CondParamEditForm

calcRemCond

private java.lang.String[] calcRemCond(java.lang.String condListName,
                                       int curIndex)

calcRemCond() - compute remainder list of condition names (R = DB - Ci) where DB is all of the Conds in the database, and Ci are the Conds in condition Ci.

Parameters:

condListName - is the condition list Ci name

curIndex - is the index of the current condition to use if not -1

Returns:

list of remainder cond names, else null if failed.

See Also:

MJAcondition.getOrderedCondNamesInCondList(java.lang.String)

buildGUI

public void buildGUI()

buildGUI() - build the graphical user interface for PopupOrderedCondChooser.

See Also:

MJAcondition#PopupOrderedCondChooserGUI, MJAcondition#CondParamEditForm, MJAproperty.getReportFontFamily(), PopupOrderedCondChooserGUI.buildPopupOrderedCondChooserGUI(), PopupOrderedCondChooserGUI.setListData(int, int, int, int, java.lang.String[], java.lang.String[]), PopupOrderedCondChooser.CondParamEditForm

addAllCondForOCL

private void addAllCondForOCL(java.lang.String cond,
                              int newCurIndex)

addAllCondForOCL() - Place cond data associated with new ordered condition list into ChooserGUI. Save old cond data, remove cond data and then add new data.

Parameters:

cond - ordered Condition list set to add conditions

newCurIndex - index for data

See Also:

getRemCondData, getSelCondData, MJAcondition.getAllCondNames(), PopupOrderedCondChooserGUI, PopupOrderedCondChooserGUI.buildPopupOrderedCondChooserGUI(), PopupOrderedCondChooserGUI.setListData(int, int, int, int, java.lang.String[], java.lang.String[])

getOCLidxFromName

int getOCLidxFromName(java.lang.String oclName)

getOCLidxFromName() - Look up and return index of current ocl.

Parameters:

oclName - name of ordered condition list

Returns:

index or -1 for none.

getOCLnameFromIdx

java.lang.String getOCLnameFromIdx(int oclIdx)

getOCLnameFromIdx() - Look up and return name of current ocl.

Parameters:

oclIdx - of ordered condition list

Returns:

name or null for none.

getRemCondDataFromChooserGUI

private java.lang.String[] getRemCondDataFromChooserGUI(int index)

getRemCondDataFromChooserGUI() - get remainder data from chooserGUI

Parameters:

index - which ocl

Returns:

list of remainder data

getSelCondDataFromChooserGUI

private java.lang.String[] getSelCondDataFromChooserGUI(int index)

getSelCondDataFromChooserGUI() - get selected data from chooserGUI

Parameters:

index - which ocl

Returns:

list of selected data

getSelCondData

private java.lang.String[] getSelCondData(int index)

getSelCondData() - get Select data, locally.

Parameters:

index - which ocl

Returns:

list of selected data

getRemCondData

private java.lang.String[] getRemCondData(int index)

getRemCondData() - get remainder data, locally.

Parameters:

index - which ocl

Returns:

list of remainder data

paint

public void paint(java.awt.Graphics g)

paint() - repaint full scrolled text area.

Overrides:

paint in class java.awt.Container

update

public void update(java.awt.Graphics g)

update() - update window

Overrides:

update in class java.awt.Container

Parameters:

g - is graphics context

updateInfo

void updateInfo(java.lang.String condName)

updateInfo() - update the info text fields for selected HP. If the sample does not exist in the database, then it is a NO-OP.

Parameters:

sampleName - is the sample number to be displayed

See Also:

Component.repaint()

saveAllCondsToMaeState

private void saveAllCondsToMaeState()

saveAllCondsToMaeState() - save all conditions to MAExplorer state

See Also:

saveCondState(PopupOrderedCondChooser.OclListData[], int)

addNewCondition

private void addNewCondition()

addNewCondition() - add new condition to local chooser database and leave it as the selected condition

See Also:

addAllCondForOCL(java.lang.String, int), PopupOrderedCondChooser.CondParamEditForm, MJAcondition.createNewNamedOrderedCondList(java.lang.String), MJAutil.showMsg1(java.lang.String), PopupOrderedCondChooser.OclListData

removeOCLLocally

public void removeOCLLocally()

removeOCLLocally() - remove user specified condition locally.

See Also:

PopupOrderedCondChooser.CondParamEditForm, PopupOrderedCondChooser.ChoiceList, getOCLnameFromIdx(int), MJAcondtion#setCurOCL

addNewParameter

public void addNewParameter()

addNewParameter() - add a new parameter locally. Popup window for new condition parameter name.

See Also:

PopupOrderedCondChooser.CondParamEditForm.saveData(), PopupOrderedCondChooser.CondParamEditForm, PopupOrderedCondChooser.PopupTextField

removeLocalParameter

public void removeLocalParameter()

removeLocalParameter() - remove parameter locally for all conditions

See Also:

PopupOrderedCondChooser.ChoiceList, PopupOrderedCondChooser.CondParamEditForm.saveData(), PopupOrderedCondChooser.CondParamEditForm, PopupOrderedCondChooser.PopupTextField, PopupOrderedCondChooser.OclListData

clearInfo

void clearInfo()

clearInfo() - clear info for the 3 msg areas in the PopupOrderedCondChooser

itemStateChanged

public void itemStateChanged(java.awt.event.ItemEvent ie)

itemStateChanged() - user clicked on condtion in the ocl list, must change CondParamEditForm data, remainder and selected data, save condForm data.

Specified by:

itemStateChanged in interface java.awt.event.ItemListener

Parameters:

ie - ItemEvent

See Also:

#addAllCondForOcl, PopupOrderedCondChooser.CondParamEditForm.saveData()

handleEvent

public boolean handleEvent(java.awt.Event evt)

handleEvent() - process special events

Overrides:

handleEvent in class java.awt.Component

Parameters:

evt - is special events

actionPerformed

public void actionPerformed(java.awt.event.ActionEvent e)

actionPerformed() - Handle Control panel button clicks

Specified by:

actionPerformed in interface java.awt.event.ActionListener

Parameters:

e - is ActionEvent

See Also:

addNewCondition(), addNewParameter(), PopupOrderedCondChooser.CondDialogBox, MJACondition#popupListOCLReport, removeLocalParameter(), removeOCLLocally(), saveAllCondsToMaeState()

saveCondState

private boolean saveCondState(PopupOrderedCondChooser.OclListData[] oclLdList,
                              int nCondLists)

saveCondState() - saves all conditions and ocl param (N,V) data to MAE via MJAcondition. This replaces the old MAExplorer condition lists with the new ones.

Parameters:

oclLdList - is list of all conditions

condLen - size of oclLdList

See Also:

MJAcondition.createNewCondList(java.lang.String), MJAcondition.getNbrOrderedCondLists(), MJAcondition.getOrderedCondListsNames(), MJAcondition#sOrderedCondList, MJAcondition.removeNamedOrderedCondList(java.lang.String), MJAcondition.setCondParamNames(java.lang.String[]), MJAcondition.setOclParamValue(java.lang.String, java.lang.String[]), MJAcondition.setCondInOrderedCondList(java.lang.String, java.lang.String[], int)

close

public void close()

close() - close this popup

windowClosing

public void windowClosing(java.awt.event.WindowEvent e)

windowClosing() - close down the window.

Specified by:

windowClosing in interface java.awt.event.WindowListener

Parameters:

e - Window Event

See Also:

PopupOrderedCondChooser.CondDialogBox, saveCondState(PopupOrderedCondChooser.OclListData[], int)

windowOpened

public void windowOpened(java.awt.event.WindowEvent e)

Specified by:

windowOpened in interface java.awt.event.WindowListener

windowActivated

public void windowActivated(java.awt.event.WindowEvent e)

Specified by:

windowActivated in interface java.awt.event.WindowListener

windowClosed

public void windowClosed(java.awt.event.WindowEvent e)

Specified by:

windowClosed in interface java.awt.event.WindowListener

windowDeactivated

public void windowDeactivated(java.awt.event.WindowEvent e)

Specified by:

windowDeactivated in interface java.awt.event.WindowListener

windowDeiconified

public void windowDeiconified(java.awt.event.WindowEvent e)

Specified by:

windowDeiconified in interface java.awt.event.WindowListener

windowIconified

public void windowIconified(java.awt.event.WindowEvent e)

Specified by:

windowIconified in interface java.awt.event.WindowListener

updateCurGene

public void updateCurGene(int mid)

updateCurGene() - update any data since current gene has changed. This is invoked from the PopupRegistry

Parameters:

mid - is the MID (Master Gene ID) that is the new current gene.

updateFilter

public void updateFilter()

updateFilter() - update any dependent data since Filter has changed. This is invoked from the PopupRegistry

updateSlider

public void updateSlider()

updateSlider() - update any dependent data sincea threshold slider has changed. This is invoked from the PopupRegistry.

updateLabels

public void updateLabels()

updateLabels() - update any dependent data since global labels have changed. This is invoked from the PopupRegistry.