Class ExprProfilePopup

java.lang.Object
  |
  +--java.awt.Component
        |
        +--java.awt.Container
              |
              +--java.awt.Window
                    |
                    +--java.awt.Frame
                          |
                          +--ExprProfilePopup

All Implemented Interfaces:

javax.accessibility.Accessible, java.awt.event.ActionListener, java.util.EventListener, java.awt.image.ImageObserver, java.awt.event.ItemListener, java.awt.MenuContainer, java.io.Serializable, java.awt.event.WindowListener

class ExprProfilePopup

extends java.awt.Frame

implements java.awt.event.ActionListener, java.awt.event.ItemListener, java.awt.event.WindowListener

This class creates and displays a popup window containing an ExprProfilePanel. The ExprProfilePanel contains an ExprProfileCanvas. It also services the control buttons.

This work was produced by Peter Lemkin of the National Cancer Institute, an agency of the United States Government. As a work of the United States Government there is no associated copyright. It is offered as open source software under the Mozilla Public License (version 1.1) subject to the limitations noted in the accompanying LEGAL file. This notice must be included with the code. The MAExplorer Mozilla and Legal files are available on http://maexplorer.sourceforge.net/.

Version:

$Date: 2002/10/14 20:17:26 $ $Revision: $

Author:

P. Lemkin (NCI), G. Thornwall (SAIC), NCI-Frederick, Frederick, MD

See Also:

MAExplorer Home, Serialized Form

Inner classes inherited from class java.awt.Frame

java.awt.Frame.AccessibleAWTFrame

Inner classes inherited from class java.awt.Window

java.awt.Window.AccessibleAWTWindow

Inner classes inherited from class java.awt.Container

java.awt.Container.AccessibleAWTContainer

Inner classes inherited from class java.awt.Component

java.awt.Component.AccessibleAWTComponent, java.awt.Component.AWTTreeLock

Field Summary

private boolean	addButtonsFlag flag: if false, don't add title or Close button
(package private) static int	EP_BUTTON_HEIGHT hight of expression profile ploit
private ExprProfilePanel	eppl panel we put into this popup window
private MAExplorer	mae link to global MAExplorer instance
private java.awt.Button	plotStyleButton plot style (line, circle, curve) button
private int	preferredHeight prefered height canvas size, 0 to use defaults
private int	preferredWidth prefered width canvas size, 0 to use defaults
private java.awt.Button	saveAsGIF Save display as GIF file
private java.awt.Checkbox	showErrBarsCheckBox checkbox to show error bars
private java.awt.Button	zoomBarsButton zoom magnification button

Fields inherited from class java.awt.Frame

base, CROSSHAIR_CURSOR, DEFAULT_CURSOR, E_RESIZE_CURSOR, frameSerializedDataVersion, HAND_CURSOR, icon, ICONIFIED, mbManagement, menuBar, MOVE_CURSOR, N_RESIZE_CURSOR, nameCounter, NE_RESIZE_CURSOR, NORMAL, NW_RESIZE_CURSOR, ownedWindows, resizable, S_RESIZE_CURSOR, SE_RESIZE_CURSOR, serialVersionUID, state, SW_RESIZE_CURSOR, TEXT_CURSOR, title, W_RESIZE_CURSOR, WAIT_CURSOR, weakThis

Fields inherited from class java.awt.Window

active, dbg, focusMgr, inputContext, inputContextLock, OPENED, ownedWindowList, showWithParent, warningString, windowListener, windowSerializedDataVersion

Fields inherited from class java.awt.Container

component, containerListener, containerSerializedDataVersion, dispatcher, layoutMgr, listeningBoundsChildren, listeningChildren, maxSize, ncomponents, printing, printingThreads

Fields inherited from class java.awt.Component

accessibleContext, actionListenerK, adjustmentListenerK, appContext, background, BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, changeSupport, componentListener, componentListenerK, componentOrientation, componentSerializedDataVersion, containerListenerK, cursor, dropTarget, enabled, eventMask, focusListener, focusListenerK, font, foreground, graphicsConfig, hasFocus, height, hierarchyBoundsListener, hierarchyBoundsListenerK, hierarchyListener, hierarchyListenerK, incRate, inputMethodListener, inputMethodListenerK, isInc, isPacked, itemListenerK, keyListener, keyListenerK, LEFT_ALIGNMENT, locale, LOCK, metrics, minSize, mouseListener, mouseListenerK, mouseMotionListener, mouseMotionListenerK, name, nameExplicitlySet, newEventsOnly, ownedWindowK, parent, peer, peerFont, popups, prefSize, privateKey, RIGHT_ALIGNMENT, textListenerK, TOP_ALIGNMENT, valid, visible, width, windowClosingException, windowListenerK, x, y

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Constructor Summary

(package private)

ExprProfilePopup(MAExplorer mae, int mid, java.lang.String title, java.awt.Font font, int preferredWidth, int preferredHeight, boolean drawLabelsFlag) ExprProfilePopup() - Constructor to popup expression profile window.

Method Summary

void	actionPerformed(java.awt.event.ActionEvent e) actionPerformed() - event handler for button clicks
java.awt.Dimension	getMinimumSize() getMinimumSize() - get the minimum preferred window size and add on room for the buttons at the bottom.
java.awt.Dimension	getPreferredSize() getPreferredSize() - get the preferred size
void	itemStateChanged(java.awt.event.ItemEvent e)
void	paint(java.awt.Graphics g) paint() - repaint buttons and canvas
(package private) void	quit() quit() - dispose of this object
(package private) void	updateData(int mid, java.lang.String title, boolean drawLabelsFlag) updateData() - update expression profile with new gene data.
void	windowActivated(java.awt.event.WindowEvent e)
void	windowClosed(java.awt.event.WindowEvent e)
void	windowClosing(java.awt.event.WindowEvent e) windowClosing() - closing down the window, get rid of the frame.
void	windowDeactivated(java.awt.event.WindowEvent e)
void	windowDeiconified(java.awt.event.WindowEvent e)
void	windowIconified(java.awt.event.WindowEvent e)
void	windowOpened(java.awt.event.WindowEvent e)

Methods inherited from class java.awt.Frame

, addNotify, addToFrameList, constructComponentName, finalize, getAccessibleContext, getCursorType, getFrames, getIconImage, getMenuBar, getState, getTitle, initIDs, isResizable, paramString, postProcessKeyEvent, readObject, remove, removeFromFrameList, removeNotify, setCursor, setIconImage, setMenuBar, setResizable, setState, setTitle, writeObject

Methods inherited from class java.awt.Window

addOwnedWindow, addWindowListener, adjustListeningChildren, applyResourceBundle, applyResourceBundle, connectOwnedWindow, dispatchEventImpl, dispose, eventEnabled, getFocusOwner, getGraphicsConfiguration, getInputContext, getListeners, getLocale, getOwnedWindows, getOwner, getToolkit, getWarningString, hide, isActive, isShowing, nextFocus, ownedInit, pack, postEvent, postWindowEvent, preProcessKeyEvent, processEvent, processWindowEvent, removeOwnedWindow, removeWindowListener, resetGC, setCursor, setFocusOwner, setWarningString, show, toBack, toFront, transferFocus

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, addImpl, applyOrientation, checkGD, countComponents, createChildHierarchyEvents, createHierarchyEvents, deliverEvent, dispatchEventToSelf, doLayout, findComponentAt, findComponentAt, findComponentAt, getAccessibleAt, getAccessibleChild, getAccessibleChildrenCount, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents_NoClientCode, getComponents, getInsets, getLayout, getMaximumSize, getMouseEventTarget, getWindow, insets, invalidate, invalidateTree, isAncestorOf, layout, lightweightPaint, lightweightPrint, list, list, locate, minimumSize, numListening, paintComponents, paintHeavyweightComponents, postsOldMouseEvents, preferredSize, print, printComponents, printHeavyweightComponents, processContainerEvent, proxyEnableEvents, proxyRequestFocus, remove, remove, removeAll, removeContainerListener, setFont, setLayout, update, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addPropertyChangeListener, addPropertyChangeListener, areInputMethodsEnabled, bounds, checkImage, checkImage, checkWindowClosingException, coalesceEvents, contains, contains, createImage, createImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, getAccessibleIndexInParent, getAccessibleStateSet, getBackground, getBounds, getBounds, getColorModel, getComponentOrientation, getCursor, getDropTarget, getFont_NoClientCode, getFont, getFontMetrics, getForeground, getGraphics, getHeight, getInputMethodRequests, getLocation, getLocation, getLocationOnScreen_NoTreeLock, getLocationOnScreen, getName, getNativeContainer, getParent_NoClientCode, getParent, getPeer, getSize, getSize, getToolkitImpl, getTreeLock, getWidth, getWindowForObject, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isDisplayable, isDoubleBuffered, isEnabled, isEnabledImpl, isFocusTraversable, isLightweight, isOpaque, isRecursivelyVisible, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, repaint, requestFocus, reshape, resize, resize, setBackground, setBounds, setBounds, setComponentOrientation, setDropTarget, setEnabled, setForeground, setLocale, setLocation, setLocation, setName, setSize, setSize, setVisible, show, size, toString, transferFocus

Methods inherited from class java.lang.Object

clone, equals, getClass, hashCode, notify, notifyAll, registerNatives, wait, wait, wait

Methods inherited from interface java.awt.MenuContainer

getFont, postEvent

Field Detail

mae

private MAExplorer mae

link to global MAExplorer instance

EP_BUTTON_HEIGHT

static final int EP_BUTTON_HEIGHT

hight of expression profile ploit

eppl

private ExprProfilePanel eppl

panel we put into this popup window

preferredHeight

private int preferredHeight

prefered height canvas size, 0 to use defaults

preferredWidth

private int preferredWidth

prefered width canvas size, 0 to use defaults

showErrBarsCheckBox

private java.awt.Checkbox showErrBarsCheckBox

checkbox to show error bars

saveAsGIF

private java.awt.Button saveAsGIF

Save display as GIF file

plotStyleButton

private java.awt.Button plotStyleButton

plot style (line, circle, curve) button

zoomBarsButton

private java.awt.Button zoomBarsButton

zoom magnification button

addButtonsFlag

private boolean addButtonsFlag

flag: if false, don't add title or Close button

Constructor Detail

ExprProfilePopup

ExprProfilePopup(MAExplorer mae,
                 int mid,
                 java.lang.String title,
                 java.awt.Font font,
                 int preferredWidth,
                 int preferredHeight,
                 boolean drawLabelsFlag)

ExprProfilePopup() - Constructor to popup expression profile window.

Parameters:

mae - is the MAExplorer instance

mid - is the Master Gene Index if not -1

title - is the title for canvas label

font - is the overide labels font if not null

preferredWidth - is the canvas size, 0 to use defaults

preferredHeight, -

drawLabelsFlag - if true

See Also:

EventMenu.promptFileName(java.lang.String, java.lang.String, java.lang.String, java.lang.String, java.lang.String, boolean, boolean), ExprProfileCanvas.drawGifFile(java.lang.String), ExprProfilePanel, SampleSets.showHP_E_assignmentsPopup(), Util.nextZoomMag(int, int), Util.rmvFinalSubDirectory(java.lang.String, java.lang.String, boolean), Util.saveCmdHistory(java.lang.String), getMinimumSize()

Method Detail

getPreferredSize

public java.awt.Dimension getPreferredSize()

getPreferredSize() - get the preferred size

Overrides:

getPreferredSize in class java.awt.Container

Returns:

preferred size of window

getMinimumSize

public java.awt.Dimension getMinimumSize()

getMinimumSize() - get the minimum preferred window size and add on room for the buttons at the bottom.

Overrides:

getMinimumSize in class java.awt.Container

Returns:

minimum window size

updateData

void updateData(int mid,
                java.lang.String title,
                boolean drawLabelsFlag)

updateData() - update expression profile with new gene data. This will cause it to repaint as well.

Parameters:

mid - is the Master Gene Index if not -1

title - is the title for canvas label

drawLabelsFlag - if true

See Also:

ExprProfilePanel.updateData(int, java.lang.String, boolean)

paint

public void paint(java.awt.Graphics g)

paint() - repaint buttons and canvas

Overrides:

paint in class java.awt.Container

Parameters:

g - is graphics context

See Also:

Component.repaint()

actionPerformed

public void actionPerformed(java.awt.event.ActionEvent e)

actionPerformed() - event handler for button clicks

Specified by:

actionPerformed in interface java.awt.event.ActionListener

Parameters:

e - is button click event

See Also:

EventMenu.promptFileName(java.lang.String, java.lang.String, java.lang.String, java.lang.String, java.lang.String, boolean, boolean), ExprProfileCanvas.drawGifFile(java.lang.String), SampleSets.showHP_E_assignmentsPopup(), Util.nextZoomMag(int, int), Util.rmvFinalSubDirectory(java.lang.String, java.lang.String, boolean), Util.saveCmdHistory(java.lang.String), Component.repaint()

itemStateChanged

public void itemStateChanged(java.awt.event.ItemEvent e)

Specified by:

itemStateChanged in interface java.awt.event.ItemListener

quit

void quit()

quit() - dispose of this object

windowClosing

public void windowClosing(java.awt.event.WindowEvent e)

windowClosing() - closing down the window, get rid of the frame.

Specified by:

windowClosing in interface java.awt.event.WindowListener

Parameters:

e - is window closing event

See Also:

quit()

windowOpened

public void windowOpened(java.awt.event.WindowEvent e)

Specified by:

windowOpened in interface java.awt.event.WindowListener

windowActivated

public void windowActivated(java.awt.event.WindowEvent e)

Specified by:

windowActivated in interface java.awt.event.WindowListener

windowClosed

public void windowClosed(java.awt.event.WindowEvent e)

Specified by:

windowClosed in interface java.awt.event.WindowListener

windowDeactivated

public void windowDeactivated(java.awt.event.WindowEvent e)

Specified by:

windowDeactivated in interface java.awt.event.WindowListener

windowDeiconified

public void windowDeiconified(java.awt.event.WindowEvent e)

Specified by:

windowDeiconified in interface java.awt.event.WindowListener

windowIconified

public void windowIconified(java.awt.event.WindowEvent e)

Specified by:

windowIconified in interface java.awt.event.WindowListener