Class ShowPlotPopup

java.lang.Object
  |
  +--java.awt.Component
        |
        +--java.awt.Container
              |
              +--java.awt.Window
                    |
                    +--java.awt.Frame
                          |
                          +--ShowPlotPopup

All Implemented Interfaces:

javax.accessibility.Accessible, java.awt.event.ActionListener, java.awt.event.AdjustmentListener, java.util.EventListener, java.awt.image.ImageObserver, java.awt.event.ItemListener, java.awt.MenuContainer, java.awt.event.MouseListener, java.io.Serializable, java.awt.event.WindowListener

class ShowPlotPopup

extends java.awt.Frame

implements java.awt.event.AdjustmentListener, java.awt.event.ActionListener, java.awt.event.MouseListener, java.awt.event.ItemListener, java.awt.event.WindowListener

The class popups a plot window containing one of several types of plots. The plot type is determined by the plotMode parameter and include scatter plots, intensity histograms, ratio histograms, clustergrams, etc. It includes a variable set of control buttons on the bottom depending on what type of plot is being presented.

This work was produced by Peter Lemkin of the National Cancer Institute, an agency of the United States Government. As a work of the United States Government there is no associated copyright. It is offered as open source software under the Mozilla Public License (version 1.1) subject to the limitations noted in the accompanying LEGAL file. This notice must be included with the code. The MAExplorer Mozilla and Legal files are available on http://maexplorer.sourceforge.net/.

Version:

$Date: 2003/03/10 19:26:08 $ $Revision: 1.5 $

Author:

P. Lemkin (NCI), G. Thornwall (SAIC), NCI-Frederick, Frederick, MD

See Also:

MAExplorer Home, Serialized Form

Inner classes inherited from class java.awt.Frame

java.awt.Frame.AccessibleAWTFrame

Inner classes inherited from class java.awt.Window

java.awt.Window.AccessibleAWTWindow

Inner classes inherited from class java.awt.Container

java.awt.Container.AccessibleAWTContainer

Inner classes inherited from class java.awt.Component

java.awt.Component.AccessibleAWTComponent, java.awt.Component.AWTTreeLock

Field Summary

private java.awt.Font	buttonFont cell label font
private java.awt.Button	closeButton close window button
(package private) java.lang.String	defGifFile default output .gif file name
(package private) DrawClusterGram	dwCG instance of DrawClusterGram if drawing a scatter plot
(package private) DrawHistogram	dwH instance of DrawHistogram if drawing a scatter plot
(package private) DrawRatioHistogram	dwRH instance of DrawRatioHistogram if drawing a scatter plot
(package private) DrawScatterPlot	dwSP instance of DrawScatterPlot if drawing a scatter plot
(package private) int	frameHeight working frame size neight
(package private) int	frameWidth working frame size width
(package private) int	histBinMode Histogram Bind Mode using TH_xx: "= " is 1, "< " is 2, "> " is 3, "<>" is 4, "><" is 5
(package private) java.lang.String	histBinRange Histogram (intens/ratio) bin range button.
private java.awt.Button	histBinRangeButton histogram (intens/ratio) bin range button
private java.awt.Scrollbar	horizLBscr horizontal LowerBound scrollbar for canvas
private java.awt.Scrollbar	horizUBscr horizontal UpperBound scrollbar for canvas
(package private) boolean	logScalingFlag flag: toggle with Linear/Log button
private MAExplorer	mae link to global MAExplorer instance
private int	maxStepsScr number of prewired scroller steps
private java.awt.Checkbox	mouseOverCheckBox Checkbox to toggle Show "Mouse-over info"
private java.awt.Button	nonFilteredGenesButton non-Filtered genes button
(package private) boolean	outsideRangeFlag flag: toggle if "><" hist range
(package private) int	plotMode Plot mode: one of the mae.PLOT_xxxx values
(package private) static int	POPUP_HEIGHT default frame size height of popup
(package private) static int	POPUP_WIDTH default frame size width of popup
(package private) java.lang.String	popupName ARG: popup name for PopupRegistry
(package private) int	popupPropertyBits ARG: property bius for PopupRegistry
private java.awt.Button	reFilterHistButton reFilterHist/NoreFilterHist button
(package private) boolean	reFilterHistFlag flag: toggle with reFilterHist/NoreFilterHist button
private java.awt.Button	saveAsButton "SaveAs" GIF image button
private java.awt.Button	scalingButton [DEPRICATED] Linear/Log button
(package private) boolean	showNonFilteredGenesFlag flag: toggle non-Filtered genes button
private java.awt.Panel	sPanel Panel that holds scrollable canvas
(package private) static int	TH_EQ threshold Button tests "= "
(package private) static int	TH_GT threshold Button tests "> "
(package private) static int	TH_IN threshold Button tests "<>"
(package private) static int	TH_LT threshold Button tests "< "
(package private) static int	TH_OUT threshold Button tests "><"
(package private) java.lang.String	title ARG: title of popup plot
private java.awt.Scrollbar	vertLBscr vertical LowerBound scrollbar for canvas
private java.awt.Scrollbar	vertUBscr vertical UpperBound scrollbar for canvas
private int	visibleScr scrollbar's 'visible' amount

Fields inherited from class java.awt.Frame

base, CROSSHAIR_CURSOR, DEFAULT_CURSOR, E_RESIZE_CURSOR, frameSerializedDataVersion, HAND_CURSOR, icon, ICONIFIED, mbManagement, menuBar, MOVE_CURSOR, N_RESIZE_CURSOR, nameCounter, NE_RESIZE_CURSOR, NORMAL, NW_RESIZE_CURSOR, ownedWindows, resizable, S_RESIZE_CURSOR, SE_RESIZE_CURSOR, serialVersionUID, state, SW_RESIZE_CURSOR, TEXT_CURSOR, W_RESIZE_CURSOR, WAIT_CURSOR, weakThis

Fields inherited from class java.awt.Window

active, dbg, focusMgr, inputContext, inputContextLock, OPENED, ownedWindowList, showWithParent, warningString, windowListener, windowSerializedDataVersion

Fields inherited from class java.awt.Container

component, containerListener, containerSerializedDataVersion, dispatcher, layoutMgr, listeningBoundsChildren, listeningChildren, maxSize, ncomponents, printing, printingThreads

Fields inherited from class java.awt.Component

accessibleContext, actionListenerK, adjustmentListenerK, appContext, background, BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, changeSupport, componentListener, componentListenerK, componentOrientation, componentSerializedDataVersion, containerListenerK, cursor, dropTarget, enabled, eventMask, focusListener, focusListenerK, font, foreground, graphicsConfig, hasFocus, height, hierarchyBoundsListener, hierarchyBoundsListenerK, hierarchyListener, hierarchyListenerK, incRate, inputMethodListener, inputMethodListenerK, isInc, isPacked, itemListenerK, keyListener, keyListenerK, LEFT_ALIGNMENT, locale, LOCK, metrics, minSize, mouseListener, mouseListenerK, mouseMotionListener, mouseMotionListenerK, name, nameExplicitlySet, newEventsOnly, ownedWindowK, parent, peer, peerFont, popups, prefSize, privateKey, RIGHT_ALIGNMENT, textListenerK, TOP_ALIGNMENT, valid, visible, width, windowClosingException, windowListenerK, x, y

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Constructor Summary

(package private)

ShowPlotPopup(MAExplorer mae, int plotMode, java.lang.String title, java.lang.String popupName, int popupPropertyBits, int frmOffset) ShowPlotPopup() - constructor to create a spreadsheet from raw data with URL spec.

Method Summary

void	actionPerformed(java.awt.event.ActionEvent e) actionPerformed() - Handle Control panel button clicks
void	adjustmentValueChanged(java.awt.event.AdjustmentEvent e) adjustmentValueChanged() - handle scroll events if plot supports scrollers.
(package private) void	close() close() - close this popup and reset flags if needed
private boolean	createPopupPlot() createPopupPlot() - create the popup plot
void	itemStateChanged(java.awt.event.ItemEvent e) itemStateChanged() - handle check box item state changed events NOTE: need to implement radio groups here since AWT only implements radio groups for Checkboxes, and not for Checkbox MenuItems.
void	mouseClicked(java.awt.event.MouseEvent e) mouseClicked() - handle mouse Click events
void	mouseDragged(java.awt.event.MouseEvent e) mouseDragged() - handle mouse Drag events
void	mouseEntered(java.awt.event.MouseEvent e) mouseEntered() - handle mouse Enter events
void	mouseExited(java.awt.event.MouseEvent e) mouseExited() - handle mouse Exit events
void	mouseMoved(java.awt.event.MouseEvent e) mouseMoved() - handle mouse Move events
void	mousePressed(java.awt.event.MouseEvent e) mousePressed() - handle mouse Press events
void	mouseReleased(java.awt.event.MouseEvent e) mouseReleased() - handle mouse Release events
private void	saveAsGifFile(java.lang.String oGifFileName) saveAsGifFile() - save plot canvas in oGifFileName
(package private) void	updateCurGene(int mid, java.lang.Object sObj) updateCurGene() - update plot if current gene changed and this type of plot requires it.
(package private) void	updateFilter(GeneList ml) updateFilter() - update plot if Filter changed and this type of plot requires it.
(package private) void	updateLabels() updateLabels() - update string report if labels changed and this type of plot requires it.
private boolean	updatePlot() updatePlot() - update the popup plot
(package private) void	updateScaling() updateScaling() - set scaling mode in proper sub-object for plotMode.
(package private) void	updateSlider() updateSlider() - update plot if Slider changed and this type of plot requires it.
void	windowActivated(java.awt.event.WindowEvent e)
void	windowClosed(java.awt.event.WindowEvent e)
void	windowClosing(java.awt.event.WindowEvent e) windowClosing() - close down the window.
void	windowDeactivated(java.awt.event.WindowEvent e)
void	windowDeiconified(java.awt.event.WindowEvent e)
void	windowIconified(java.awt.event.WindowEvent e)
void	windowOpened(java.awt.event.WindowEvent e)

Methods inherited from class java.awt.Frame

, addNotify, addToFrameList, constructComponentName, finalize, getAccessibleContext, getCursorType, getFrames, getIconImage, getMenuBar, getState, getTitle, initIDs, isResizable, paramString, postProcessKeyEvent, readObject, remove, removeFromFrameList, removeNotify, setCursor, setIconImage, setMenuBar, setResizable, setState, setTitle, writeObject

Methods inherited from class java.awt.Window

addOwnedWindow, addWindowListener, adjustListeningChildren, applyResourceBundle, applyResourceBundle, connectOwnedWindow, dispatchEventImpl, dispose, eventEnabled, getFocusOwner, getGraphicsConfiguration, getInputContext, getListeners, getLocale, getOwnedWindows, getOwner, getToolkit, getWarningString, hide, isActive, isShowing, nextFocus, ownedInit, pack, postEvent, postWindowEvent, preProcessKeyEvent, processEvent, processWindowEvent, removeOwnedWindow, removeWindowListener, resetGC, setCursor, setFocusOwner, setWarningString, show, toBack, toFront, transferFocus

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, addImpl, applyOrientation, checkGD, countComponents, createChildHierarchyEvents, createHierarchyEvents, deliverEvent, dispatchEventToSelf, doLayout, findComponentAt, findComponentAt, findComponentAt, getAccessibleAt, getAccessibleChild, getAccessibleChildrenCount, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents_NoClientCode, getComponents, getInsets, getLayout, getMaximumSize, getMinimumSize, getMouseEventTarget, getPreferredSize, getWindow, insets, invalidate, invalidateTree, isAncestorOf, layout, lightweightPaint, lightweightPrint, list, list, locate, minimumSize, numListening, paint, paintComponents, paintHeavyweightComponents, postsOldMouseEvents, preferredSize, print, printComponents, printHeavyweightComponents, processContainerEvent, proxyEnableEvents, proxyRequestFocus, remove, remove, removeAll, removeContainerListener, setFont, setLayout, update, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addPropertyChangeListener, addPropertyChangeListener, areInputMethodsEnabled, bounds, checkImage, checkImage, checkWindowClosingException, coalesceEvents, contains, contains, createImage, createImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, getAccessibleIndexInParent, getAccessibleStateSet, getBackground, getBounds, getBounds, getColorModel, getComponentOrientation, getCursor, getDropTarget, getFont_NoClientCode, getFont, getFontMetrics, getForeground, getGraphics, getHeight, getInputMethodRequests, getLocation, getLocation, getLocationOnScreen_NoTreeLock, getLocationOnScreen, getName, getNativeContainer, getParent_NoClientCode, getParent, getPeer, getSize, getSize, getToolkitImpl, getTreeLock, getWidth, getWindowForObject, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isDisplayable, isDoubleBuffered, isEnabled, isEnabledImpl, isFocusTraversable, isLightweight, isOpaque, isRecursivelyVisible, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, repaint, requestFocus, reshape, resize, resize, setBackground, setBounds, setBounds, setComponentOrientation, setDropTarget, setEnabled, setForeground, setLocale, setLocation, setLocation, setName, setSize, setSize, setVisible, show, size, toString, transferFocus

Methods inherited from class java.lang.Object

clone, equals, getClass, hashCode, notify, notifyAll, registerNatives, wait, wait, wait

Methods inherited from interface java.awt.MenuContainer

getFont, postEvent

Field Detail

mae

private MAExplorer mae

link to global MAExplorer instance

TH_EQ

static final int TH_EQ

threshold Button tests "= "

TH_LT

static final int TH_LT

threshold Button tests "< "

TH_GT

static final int TH_GT

threshold Button tests "> "

TH_IN

static final int TH_IN

threshold Button tests "<>"

TH_OUT

static final int TH_OUT

threshold Button tests "><"

POPUP_WIDTH

static final int POPUP_WIDTH

default frame size width of popup

POPUP_HEIGHT

static final int POPUP_HEIGHT

default frame size height of popup

title

java.lang.String title

ARG: title of popup plot

plotMode

int plotMode

Plot mode: one of the mae.PLOT_xxxx values

frameWidth

int frameWidth

working frame size width

frameHeight

int frameHeight

working frame size neight

popupName

java.lang.String popupName

ARG: popup name for PopupRegistry

popupPropertyBits

int popupPropertyBits

ARG: property bius for PopupRegistry

buttonFont

private java.awt.Font buttonFont

cell label font

sPanel

private java.awt.Panel sPanel

Panel that holds scrollable canvas

vertLBscr

private java.awt.Scrollbar vertLBscr

vertical LowerBound scrollbar for canvas

vertUBscr

private java.awt.Scrollbar vertUBscr

vertical UpperBound scrollbar for canvas

horizLBscr

private java.awt.Scrollbar horizLBscr

horizontal LowerBound scrollbar for canvas

horizUBscr

private java.awt.Scrollbar horizUBscr

horizontal UpperBound scrollbar for canvas

mouseOverCheckBox

private java.awt.Checkbox mouseOverCheckBox

Checkbox to toggle Show "Mouse-over info"

closeButton

private java.awt.Button closeButton

close window button

histBinRangeButton

private java.awt.Button histBinRangeButton

histogram (intens/ratio) bin range button

reFilterHistButton

private java.awt.Button reFilterHistButton

reFilterHist/NoreFilterHist button

scalingButton

private java.awt.Button scalingButton

[DEPRICATED] Linear/Log button

nonFilteredGenesButton

private java.awt.Button nonFilteredGenesButton

non-Filtered genes button

saveAsButton

private java.awt.Button saveAsButton

"SaveAs" GIF image button

histBinRange

java.lang.String histBinRange

Histogram (intens/ratio) bin range button. This button will contain values: "= ", "< ", "> ", "<>", "><"

histBinMode

int histBinMode

Histogram Bind Mode using TH_xx: "= " is 1, "< " is 2, "> " is 3, "<>" is 4, "><" is 5

maxStepsScr

private int maxStepsScr

number of prewired scroller steps

visibleScr

private int visibleScr

scrollbar's 'visible' amount

outsideRangeFlag

boolean outsideRangeFlag

flag: toggle if "><" hist range

reFilterHistFlag

boolean reFilterHistFlag

flag: toggle with reFilterHist/NoreFilterHist button

logScalingFlag

boolean logScalingFlag

flag: toggle with Linear/Log button

showNonFilteredGenesFlag

boolean showNonFilteredGenesFlag

flag: toggle non-Filtered genes button

defGifFile

java.lang.String defGifFile

default output .gif file name

dwSP

DrawScatterPlot dwSP

instance of DrawScatterPlot if drawing a scatter plot

dwH

DrawHistogram dwH

instance of DrawHistogram if drawing a scatter plot

dwRH

DrawRatioHistogram dwRH

instance of DrawRatioHistogram if drawing a scatter plot

dwCG

DrawClusterGram dwCG

instance of DrawClusterGram if drawing a scatter plot

Constructor Detail

ShowPlotPopup

ShowPlotPopup(MAExplorer mae,
              int plotMode,
              java.lang.String title,
              java.lang.String popupName,
              int popupPropertyBits,
              int frmOffset)

ShowPlotPopup() - constructor to create a spreadsheet from raw data with URL spec. use same name for URL as in the cell.

Parameters:

mae - is the MAExplorer instance

plotMode - is the mae.PLOT_xxxx state

title - is the title of plot

popupName - is the name for the PopupRegistry

popupPropertyBits - are the property bits for the PopupRegistry

frmOffset - is the frame offset in pixels

See Also:

PopupRegistry.addPopupWindowToReg(ShowPlotPopup, java.lang.String, int), PopupRegistry.removePopupByKey(java.lang.String), createPopupPlot()

Method Detail

createPopupPlot

private boolean createPopupPlot()

createPopupPlot() - create the popup plot

Returns:

false if there is problem.

See Also:

DrawClusterGram, DrawHistogram, DrawRatioHistogram, DrawScatterPlot, SampleSets.setHPxyModStrings(), updateScaling()

updatePlot

private boolean updatePlot()

updatePlot() - update the popup plot

Returns:

false if there is problem.

See Also:

DrawClusterGram.updateCGplot(GeneList, HierClustNode), DrawHistogram.updateHistogramPlot(), DrawRatioHistogram.updateRatioHistogramPlot(), DrawScatterPlot.updateScatterPlot()

actionPerformed

public void actionPerformed(java.awt.event.ActionEvent e)

actionPerformed() - Handle Control panel button clicks

Specified by:

actionPerformed in interface java.awt.event.ActionListener

Parameters:

e - is ActionEvent for buttons in control panel

See Also:

DrawClusterGram.actionPerformed(java.awt.event.ActionEvent), EventMenu.promptFileName(java.lang.String, java.lang.String, java.lang.String, java.lang.String, java.lang.String, boolean, boolean), Util.rmvFinalSubDirectory(java.lang.String, java.lang.String, boolean), Util.saveCmdHistory(java.lang.String), close(), saveAsGifFile(java.lang.String), updateScaling()

updateScaling

void updateScaling()

updateScaling() - set scaling mode in proper sub-object for plotMode. This may other side effects in terms of repainting.

See Also:

DrawHistogram.updateScaling(boolean), DrawRatioHistogram.updateScaling(boolean), Draw2Dplot.updateScaling(boolean, boolean)

saveAsGifFile

private void saveAsGifFile(java.lang.String oGifFileName)

saveAsGifFile() - save plot canvas in oGifFileName

Parameters:

oGifFileName - is full path file name of saved GIF file.

See Also:

ClusterGramCanvas.drawGifFile(java.lang.String), DrawHistogram.drawGifFile(java.lang.String), DrawRatioHistogram.drawGifFile(java.lang.String), DrawScatterPlot.drawGifFile(java.lang.String)

windowClosing

public void windowClosing(java.awt.event.WindowEvent e)

windowClosing() - close down the window.

Specified by:

windowClosing in interface java.awt.event.WindowListener

Parameters:

e - is window closing event

See Also:

close()

windowOpened

public void windowOpened(java.awt.event.WindowEvent e)

Specified by:

windowOpened in interface java.awt.event.WindowListener

windowActivated

public void windowActivated(java.awt.event.WindowEvent e)

Specified by:

windowActivated in interface java.awt.event.WindowListener

windowClosed

public void windowClosed(java.awt.event.WindowEvent e)

Specified by:

windowClosed in interface java.awt.event.WindowListener

windowDeactivated

public void windowDeactivated(java.awt.event.WindowEvent e)

Specified by:

windowDeactivated in interface java.awt.event.WindowListener

windowDeiconified

public void windowDeiconified(java.awt.event.WindowEvent e)

Specified by:

windowDeiconified in interface java.awt.event.WindowListener

windowIconified

public void windowIconified(java.awt.event.WindowEvent e)

Specified by:

windowIconified in interface java.awt.event.WindowListener

mousePressed

public void mousePressed(java.awt.event.MouseEvent e)

mousePressed() - handle mouse Press events

Specified by:

mousePressed in interface java.awt.event.MouseListener

Parameters:

e - is mouse pressed event

See Also:

DrawClusterGram.mousePressed(java.awt.event.MouseEvent), DrawHistogram.mousePressed(java.awt.event.MouseEvent), DrawRatioHistogram.mousePressed(java.awt.event.MouseEvent), Draw2Dplot.mousePressed(java.awt.event.MouseEvent)

mouseReleased

public void mouseReleased(java.awt.event.MouseEvent e)

mouseReleased() - handle mouse Release events

Specified by:

mouseReleased in interface java.awt.event.MouseListener

Parameters:

e - is mouse released event

See Also:

DrawClusterGram.mouseReleased(java.awt.event.MouseEvent), DrawHistogram.mouseReleased(java.awt.event.MouseEvent), DrawRatioHistogram.mouseReleased(java.awt.event.MouseEvent), Draw2Dplot.mouseReleased(java.awt.event.MouseEvent)

mouseClicked

public void mouseClicked(java.awt.event.MouseEvent e)

mouseClicked() - handle mouse Click events

Specified by:

mouseClicked in interface java.awt.event.MouseListener

Parameters:

e - is mouse clicked event

See Also:

DrawClusterGram.mouseClicked(java.awt.event.MouseEvent), DrawHistogram.mousePressed(java.awt.event.MouseEvent), DrawRatioHistogram.mousePressed(java.awt.event.MouseEvent), Draw2Dplot.mousePressed(java.awt.event.MouseEvent)

mouseMoved

public void mouseMoved(java.awt.event.MouseEvent e)

mouseMoved() - handle mouse Move events

Parameters:

e - is mouse moved event

See Also:

DrawClusterGram.mouseMoved(java.awt.event.MouseEvent), DrawHistogram.mouseMoved(java.awt.event.MouseEvent), DrawRatioHistogram.mouseMoved(java.awt.event.MouseEvent), Draw2Dplot.mouseMoved(java.awt.event.MouseEvent)

mouseDragged

public void mouseDragged(java.awt.event.MouseEvent e)

mouseDragged() - handle mouse Drag events

Parameters:

e - is mouse dragged event

See Also:

DrawClusterGram.mouseDragged(java.awt.event.MouseEvent), DrawHistogram.mouseDragged(java.awt.event.MouseEvent), DrawRatioHistogram.mouseDragged(java.awt.event.MouseEvent), Draw2Dplot.mouseDragged(java.awt.event.MouseEvent)

mouseEntered

public void mouseEntered(java.awt.event.MouseEvent e)

mouseEntered() - handle mouse Enter events

Specified by:

mouseEntered in interface java.awt.event.MouseListener

Parameters:

e - is mouse entered event

See Also:

DrawClusterGram.mouseEntered(java.awt.event.MouseEvent), DrawHistogram.mouseEntered(java.awt.event.MouseEvent), DrawRatioHistogram.mouseEntered(java.awt.event.MouseEvent), Draw2Dplot.mouseEntered(java.awt.event.MouseEvent)

mouseExited

public void mouseExited(java.awt.event.MouseEvent e)

mouseExited() - handle mouse Exit events

Specified by:

mouseExited in interface java.awt.event.MouseListener

Parameters:

e - is mouse exited event

See Also:

DrawClusterGram.mouseExited(java.awt.event.MouseEvent), DrawHistogram.mouseExited(java.awt.event.MouseEvent), DrawRatioHistogram.mouseExited(java.awt.event.MouseEvent), Draw2Dplot.mouseExited(java.awt.event.MouseEvent)

adjustmentValueChanged

public void adjustmentValueChanged(java.awt.event.AdjustmentEvent e)

adjustmentValueChanged() - handle scroll events if plot supports scrollers. Use the scroll values to select the part of the plot to be displayed and then repaint it.

Specified by:

adjustmentValueChanged in interface java.awt.event.AdjustmentListener

Parameters:

e - is scroller adjustment event

See Also:

DrawHistogram.updateScrolledRegion(float, float), Draw2Dplot.updateScrolledRegion(float, float, float, float)

itemStateChanged

public void itemStateChanged(java.awt.event.ItemEvent e)

itemStateChanged() - handle check box item state changed events NOTE: need to implement radio groups here since AWT only implements radio groups for Checkboxes, and not for Checkbox MenuItems.

Specified by:

itemStateChanged in interface java.awt.event.ItemListener

Parameters:

e - is checkbox toggle event

See Also:

Util.saveCmdHistory(java.lang.String)

updateCurGene

void updateCurGene(int mid,
                   java.lang.Object sObj)

updateCurGene() - update plot if current gene changed and this type of plot requires it.

Parameters:

mid - is the new Master Gene ID of the current gene

See Also:

DrawClusterGram.updateCurGene(int), Component.repaint(), Component.repaint(), Component.repaint(), DrawScatterPlot.setCurGene(int)

updateFilter

void updateFilter(GeneList ml)

updateFilter() - update plot if Filter changed and this type of plot requires it.

Parameters:

ml - is the gene list to update now that filter has changed.

See Also:

updatePlot()

updateSlider

void updateSlider()

updateSlider() - update plot if Slider changed and this type of plot requires it.

See Also:

DrawScatterPlot.drawScatterPlot()

updateLabels

void updateLabels()

updateLabels() - update string report if labels changed and this type of plot requires it.

See Also:

updatePlot()

close

void close()

close() - close this popup and reset flags if needed

See Also:

DrawClusterGram.close(), PopupRegistry.rmvPopupFromReg(ShowPlotPopup)